Research

1. Drug Discovery

1. MolInf

   

   Generative recurrent networks for de novo drug design

   Anvita Gupta, Alex T Müller, Berend JH Huisman, Jens A Fuchs, Petra Schneider, and Gisbert Schneider

   Molecular informatics, 2018

2. 

   Innovation on the Edge: Accelerating Solutions in the Fight Against Ebola by Targeting Intrinsically Disordered Proteins

   Anvita Gupta

   White House Ebola Innovator Conference, Washington, DC, Apr 2015

2. Genomics

1. 

   Targeted optimization of regulatory DNA sequences with neural editing architectures

   Anvita Gupta, and Anshul Kundaje

   Long Talk, Intelligent Systems for Molecular Biology (ISMB), Jul 2019

3. Proteins

1. 

   A Novel AI-Designed Antimicrobial Peptide Synergistically Potentiates Aminoglycosides against Colistin-and Carbapenem-Resistant Acinetobacter baumannii

   Neena Capalash, Vipasha Thakur, Varsha Gupta, Prince Sharma, and Anvita Gupta

   bioRxiv, Nov 2023

2. 

   Feedback GAN for DNA optimizes protein functions

   Anvita Gupta, and James Zou

   Nature Machine Intelligence, Feb 2019

3. 

   Revolutionizing enzyme engineering through artificial intelligence and machine learning

   Nitu Singh, Sunny Malik, Anvita Gupta, and Kinshuk Raj Srivastava

   Emerging Topics in Life Sciences, Apr 2021

4. 

   Computational prediction and validation of specific EmbR binding site on PknH

   Insung Na, Huanqin Dai, Hantian Li, Anvita Gupta, David Kreda, Powell Zhang, Xiangyin Chen, Lixin Zhang, and Gil Alterovitz

   Synthetic and Systems Biotechnology, Dec 2021

5. 

   Feedback GAN (FBGAN) for DNA: a novel feedback-loop architecture for optimizing protein functions

   Anvita Gupta, and James Zou

   ICML IJCAI Workshop on Computational Biology, Dec 2018

4. Graph Theory

1. 

   Pancreatic Adenocarcinoma: An Analysis of Drug Therapy Options through Interaction Maps and Graph Theory

   Anvita Gupta, Sejal Aggarwal, and Sangeeta Agrawal

   Harvard Journal of Emerging Investigators, Dec 2014